VMD-L Mailing List

From: Jocelyn Rodgers (jrodgers78_at_gmail.com)
Date: Mon Jan 23 2006 - 10:29:30 CST

Hello -

I'm using the timeline with STRIDE to analyze secondary structure from
two DCD trajectory files with a total of 2001 points. When I look at
the graphical output in timeline, all residues seem classified. But
when I output the file, a portion of the data file (all residues for
some continuous period of time) has floating point numbers listed as
opposed to the typical letter classifiers H,T,etc. I haven't been
able to find documentation of this. Any idea what this means?

Thanks a lot,
Jocelyn