VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue May 05 2009 - 09:24:32 CDT

Hi,
  The water box for STMV was created with the "volmap" command
(or the GUI interface), with the "density" map type, if I recall.
The surface of the capsid was generated via MSMS one fragment at
a time, IIRC.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Tue, May 05, 2009 at 09:31:33PM +0800, ?????? wrote:
> Dear all,
> Does anyone konw how to make images like STMV on VMD website?
> (http://www.ks.uiuc.edu/Gallery/Science/Structure/tn/cover_fig_st.jpg.html>
> )
> I am very interested in making the water box and ions in this picture, which
> is beautiful and proteins can be seen clearly.
> Thank you.
>
> Best,
> Wenchang 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
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