VMD-L Mailing List
From: Dongsheng Zhang (zhdsheng21_at_gmail.com)
Date: Sun Mar 09 2008 - 22:44:32 CDT
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Hi, VMD users,
I tried to use pbc join bonded to prevent the break of bonded molecule
due to periodic boundary condition. My procedure is as follows:
1. load the molecule
2. in VMD console, type: package require pbctools
3 type pbc join bonded -all, then VMD gives me:
usage: pbc <command> [args...]
Setting/getting PBC information:
set $cell [options...]
get [options...]
readxst $xstfile [options...]
Drawing a box:
box [options...]
(Un)Wrapping atoms:
wrap [options...]
unwrap [options...]
It looks like that "join" is not a valid subcommand for pbc. Have I
missed anything? Thank you for your help!
All the best!
Dongsheng
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