VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Jan 04 2008 - 13:01:37 CST

Hi,
  Looks like you may have found a bug in molefacture, I'll let
Peter answer this one.

  John

On Fri, Jan 04, 2008 at 12:59:00PM -0600, snoze pa wrote:
> Dear VMD users,
>
> When I am adding hydrogen i am getting following error message! Any idea
>
> Error: AtomSeclect: Set data element has zero term (instead of 3)
>
> thanks in advance
> s
>
> Detail:
>
> atomselect: set: data element 0 has 0 terms (instead of 3)
> atomselect: set: data element 0 has 0 terms (instead of 3)
> while executing
> "$sel set {x y z} [ldup [$sel num] $vect]"
> (procedure "vmd_atomselect_moveto" line 2)
> invoked from within
> "vmd_atomselect_moveto {atomselect9266} {}"
> invoked from within
> "$hydro moveto $movecoor"
> (procedure "add_hydrogen_noupdate" line 51)
> invoked from within
> "add_hydrogen_noupdate"
> (procedure "::Molefacture::add_all_hydrogen" line 19)
> invoked from within
> "::Molefacture::add_all_hydrogen"
> (menu invoke) 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078