VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Oct 24 2007 - 17:24:52 CDT

Hi,
  You could presumably write a NAMDBin restart file from VMD, but you'd
probably be just as well served by writing a PDB I'm guessing. Try using
  $sel writenamdbin foo.coor

Cheers,
  John Stone
  johns_at_ks.uiuc.edu

On Wed, Oct 24, 2007 at 11:33:05AM +1000, poker_at_physics.usyd.edu.au wrote:
> Is there a text command available to write a loaded molecule in vmd as a
> .coor file used for NAMD simulations?
>
> I'm planning on using such a command in an automated script to save time
> manually converting pdb files into NAMD binary coordinates.
>
> Thanks,
> Poker.
>
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