VMD-L Mailing List

From: Vlad Cojocaru (Vlad.Cojocaru_at_mpi-bpc.mpg.de)
Date: Mon May 27 2002 - 09:30:59 CDT

Dear VMD users,
    I have two RNA molecules. I would like to fit them using the
backbone and calculate the rmsd. Can anyone give a hint how can you do
that with vmd. I would also like to visualize the 2 fitted structures at
once in order to see how they overlay.
   Thank you very much for any kind of help
vlad 

-- 
Vlad Cojocaru 
Max Planck Institut for Biophysical Chemistry 
Deparment: 060 
Am Fassberg 11, 37077 Goettingen, Germany 
tel: ++49-551-201.1389 
e-mail: Vlad.Cojocaru_at_mpi-bpc.mpg.de