VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Jun 13 2007 - 03:04:49 CDT

Hi,
  Can you actually send the text of the error message you're
getting from psfgen? I will have to check with the authors of
psfgen etc to determine what's going on there. If you can provide
us with a copy of the files and the error messages you're getting
that would be very helpful. Don't mail the files to the VMD-L mailing
list, either post them on the web or deposit them into the VMD
biofs area on biocore, see:
  http://www.ks.uiuc.edu/Research/vmd/alpha/

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Jun 11, 2007 at 05:52:23AM +0000, Moumita Maiti wrote:
> Hi,
>
> We had installed vmd source file in AMD opteron system and
> pentium clusters. vmd works fine for pentium machine.
>
> But vmd can not load a molecule in AMD opteron system which has redhat
> operating system(OS) if the cluster is logged in from mandrake operating
> system. It works if we login from fedora/redhat OS.
>
> Running psfgen pgn file with vmd in AMD system gives CMAP error in any OS,
> whereas same input pgn file and topology file does not give any CMAP error
> in pentium cluster.
>
> What can be the possible problems?
>
> Regards,
> moumita 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078