VMD-L Mailing List

From: Tim Meyer (tim_at_mmb.pcb.ub.es)
Date: Tue Oct 24 2006 - 08:25:47 CDT

dear all,
jmol reads a nice file format to read and visualize eigenvectors (reading xyz
coords of an atom and xyz components of 1 corresponding vector, the atom can
then be moved along the vector), is there anything comparable in vmd? i do have
john mongans ied installed however i'd like to have the vectors readily
available as atom attributes (just like the bfactor field) to draw e.g. arrows
along the vector. would that be feasable? e.g. read a vector from 3 extra
columns (81-104) from a pdb file?

thanks in advance

tim