VMD-L Mailing List

From: vvenditti_at_biochem.wisc.edu
Date: Thu Apr 06 2006 - 14:20:33 CDT

Dear all,
I runnea a MD simulation of a small using AMBER 8, but when I try to
display the trajectory using VMD the first residue is messed and the
softaware give me the following warinig in the shell:

Unusual bond between residues: 1 (none) and 2 (nucleic)

How may I do to overcome this problem?
Thanks in advance,
Vincenzo