VMD-L Mailing List

From: skolev_at_mnet.bg
Date: Wed Feb 20 2013 - 08:31:15 CST

Dear VMD users/developers

May I ask how to save the coordinates (to xyz file) of a periodic system
plus added periodic images by x,y or z axis. I have an ion that is near
the boundary of the system and some of its coordination shell molecules
are from the neighbouring cell so I want to save the file with all
coordinationg molecules.

Thank you in advance.
Stefan Kolev, PhD student

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