NAMD Wiki: NamdAtNICS

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Kraken Cray XT5 at NICS

NAMD is installed on Kraken with the scripts

/nics/b/home/jphillip/NAMD_scripts/runbatch_2.8

and

/nics/b/home/jphillip/NAMD_scripts/runbatch_2.8_smp

which link to binaries in lustre scratch (compute nodes can't access home directories).

Kraken User Guide: http://www.nics.tennessee.edu/computing-resources/kraken/user-guide

Docs at http://www.nics.tennessee.edu/computing-resources/kraken/compiling

See also NamdOnCrayXT5

KID (Keeneland Initial Delivery) GPU-accelerated cluster at NICS

NAMD is installed with the script

/nics/b/home/jphillip/KID_scripts/runbatch_2.8_cuda

which links to binaries in ~jphillip.

(Note that the KID filesystem is shared with Kraken, hence the KID_scripts directory.)