VMD-L Mailing List

From: Smith, Harper E. (smith.12510_at_buckeyemail.osu.edu)
Date: Wed Nov 04 2020 - 12:52:17 CST

Hi all,

I want to see what forces are being applied throughout my simulation, so I saved a .forcedcd file as described here: https://www.ks.uiuc.edu/Research/namd/2.9/ug/node12.html . I'm thinking I should color my protein based on the forces applied at a given step, but I'm not sure how to begin. Could someone point me in the right direction?

Best,
Harper Smith