From: Vidhya Sankar (vidhyasankar7928_at_yahoo.com)
Date: Wed Apr 10 2013 - 22:12:33 CDT
Dear Namd User I am beginner of VMD & Namd
I have Constructed My system (CNT wrapped bt Cyclic Petides)
But When I open My .gro file in VMD There is plenty of unusual bond (50 bonds) between Protein and CNT i want To Delete I am Not Able to Pick those two atom Interactively ( because structure is Shabby) So i Decided To select and delete those unusually Bonded atoms through Command prompt .it would be Highly helpful if somebody Help me in Giving commands
I need the Commands
Thanks in Advance
With Regards
S.Vidhyasankar
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