From: Chris Chipot (Christophe.Chipot_at_edam.uhp-nancy.fr)
Date: Tue Nov 06 2007 - 17:03:51 CST
Jiancong,
Concomitant mutation of several residues is possible. There is, in
principle, no limitation. Since free energy is a state function,
you can mutate the first residue prior to mutating the second,
which could serve as a consistency check.
Chris
jia a écrit :
> Dear all,
>
> Is there a possible way to calculate delta G of a double mutant using free
> energy perturbation method in NAMD? Would it be the same as a single mutant?
> Thanks.
>
> Jiancong
>
>
--
_______________________________________________________________________
Chris Chipot, Ph.D.
Equipe de dynamique des assemblages membranaires
Unité mixte de recherche CNRS/UHP No 7565
Nancy Université Phone: +33 (0)3-83-68-40-97
B.P. 239 Fax: +33 (0)3-83-68-43-87
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E-mail: Christophe.Chipot_at_edam.uhp-nancy.fr
http://www.edam.uhp-nancy.fr
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N. G. van Kampen
_______________________________________________________________________
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