From: Marcos Sotomayor (sotomayo_at_ks.uiuc.edu)
Date: Tue Mar 21 2006 - 10:28:25 CST
There is a detailed description of each of the parameters of a NAMD
configuration file in the NAMD tutorial:
Linux/MacOS version:
http://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-unix-html/index.html
Windows version:
http://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-win-html/index.html
The exclude command is explained at:
http://www.ks.uiuc.edu/Training/Tutorials/namd/namd-tutorial-unix-html/node8.html#SECTION00044100000000000000
(look at Figure 4)
Regards,
Marcos
On Tue, 21 Mar 2006, xiaojing gong wrote:
> Dear all,
> I read the user's guide, there is a parameter exclude, and in
the conf file the accept value of exlude is often scaled1-4. I don't
understand in what situation, we should use scaled1-4,or 1-2,or 1-3, or
none.
> GXJ
>
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