New Job Based On A Prior Job

Allows users to design a job based on a job that has already been run or is running.

Step 1:  Select a Job from:

this project

all projects :

 

Step 2:  Select a prior job from the table below.

	Name	Account	SimGroup	Project	Type	Status	Last Update	Details
	homedirectory3.1	uiucbdqathlonshort	Trial-1	Actin	NAMD	Running	Mon Oct 14 14:52:53 CDT 2001
	homedirectory3	uiucbdqathlonshort	Trial-1	Actin	Generic	Complete	Thu Apr 19 10:55:16 CDT 2001
	homedirectory2.9	uiucbdqathlonshort	Mod-1	Actin	Generic	Submitted	Wed Apr 18 12:21:45 CDT 2001
	homedirectory2.9a	uiucbdqathlonshort	Mod-2	Actin	NAMD	Pending	Tue Apr 17 10:55:16 CDT 2001

<--Prior 4 jobs

Table length:  Display jobs in table

Next 4 jobs -->

Step 3:  Select an account for this job:

NCSA Titan PSC Lemieux  

Status of your selected account: Job id Name User Time Use S Queue ---------------- ---------------- ---------------- -------- - ----- 34190.giant run sanderso 0 H standard 34191.giant run sanderso 0 H standard 34197.giant run sanderso 0 H standard 34198.giant run sanderso 0 H standard 34319.giant run sanderso 0 H standard 34320.giant run sanderso 0 H standard 34321.giant run sanderso 0 H standard 34327.giant re.r1.buoy.dsm sabdelwa 139:51:2 R standard 34329.giant C0.16 pmarrone 67:47:52 R standard 34331.giant dev.96 esewall 0 Q standard 34332.giant phSolver snagrath 0 Q standard 34333.giant phSolver snagrath 0 Q standard 34346.giant apoa1 rkufrin 0 Q standard 34347.giant apoa1 rkufrin 0 Q standard 34348.giant SPC_large schiu 0 Q standard 34349.giant notexd lkwagner 0 Q standard 34350.giant C0.32 pmarrone 0 Q standard 34351.giant CHXOL schiu 58:58:44 R standard 34352.giant exd lkwagner 0 Q standard 34353.giant re.r3.dsm sabdelwa 0 Q standard 34354.giant re.45stag.dsm sabdelwa 0 Q standard 34365.giant a1f24r3.re500 wipatric 0 Q standard 34387.giant re.20k.chan rkufrin 00:52:06 R standard

 

Step 4:	Enter the information required to run this job type on the selected account:
	A name for this job:
	List this job with these other simulations*:	Trial-1 Trial-2 Mod-1 Mod-2
	Working directory on the remote machine:
	NAMD executable path:
	NAMD input filename:
	Number of processors:
	Length of time for job to run:	Hours:   Minutes:    Seconds:
	Notes about this job:
	E-mail me about job status**:		Mails when job starts, stops, or if problem

Step 5:  Click the button below to generate a list of files from the prior job.

Note: areas below grayed out until this button pushed.

Step 6:  Click the button below to add any additional input or output files to the list of files for the job.

Filenames and paths below are examples only.

Step 7:  Modify files as needed by clicking on the filename.

	Input files selected for job:	BioFS source of file:
	1. samplefilename.namd	/Actin/jobs/sampledir/sampledir/
	2. samplefilename.min	/Actin/jobs/sampledir/sampledir/
	3. samplefilename.psf	/Actin/jobs/sampledir/sampledir/
	4. samplefilename.pro	/Actin/jobs/sampledir/sampledir/
	Output files expected from job:	BioFS destination for file:
	1. samplefilename.out	/Actin/jobs/sampledir/sampledir/
	2. samplefilename.coord	/Actin/jobs/sampledir/sampledir/
	3. samplefilename.rel	/Actin/jobs/sampledir/sampledir/
	4. samplefilename.dcd	/Actin/jobs/sampledir/sampledir/

 

Step 8:

* See 'View Jobs:  For this project' to add more names of groups of simulations to the drop-down menu.

**Users checking the e-mail box will receive a message when the job starts, concludes, or if there is a problem with the job.  The e-mail will go to your registration e-mail address, or you can change e-mail preferences here.

***Can edit job script from job preview page if needed.